Bothriocephalus andresi- Bothriocephalus angusticeps
- Bothriocephalus antarcticus
- Bothriocephalus barbatus
- Bothriocephalus biguttatus
- Bothriocephalus carangis
- Bothriocephalus claviceps
- Bothriocephalus cuspidatus
- Bothriocephalus euryciensis
- Bothriocephalus formosus
- Bothriocephalus gadellus
- Bothriocephalus kerguelensis
- Bothriocephalus kivuensis
- Bothriocephalus labracis
- Bothriocephalus macrophallus
- Bothriocephalus manubriformis
- Bothriocephalus occidentalis
- Bothriocephalus parvus
- Bothriocephalus pearsei
- Bothriocephalus philippinei
- Bothriocephalus phoxini
- Bothriocephalus prudhoei
- Bothriocephalus rarus
- Bothriocephalus schilbiodes
- Bothriocephalus sciuri
- Bothriocephalus scorpii
- Bothriocephalus texomensis
- Bothriocephalus typhlotritonis
- Bothriocephalus xenopi